Preclinical MTI-PASL Pipeline

Runner: pyasl.pipelines.preclinical_mti_pipeline.run_preclinical_mti_pipeline

Purpose. Unified entry for MTI-PASL workflows (load NIfTI/Analyze, fit T1, compute absolute CBF, save outputs).

Inputs

• data_dir: base directory used to resolve relative paths in step params.

• config_path: YAML config.

YAML Example

type: mti
steps:
  - module: NIfTILoader
    params:
      path: "data/preclinical_MTI_PASL/FAIREPI.img"   # resolved against data_dir
      target: AbsData
      savedir: "results_mti"
  - module: AbsCBF_T1Fit
    params:
      TI_list: [200, 400, 600, 800, 1000]
      sel_index: [1,3,5,7,9]
      glo_index: [0,2,4,6,8]
      save_curves_every: 300
  - module: SaveOutputs